| SnB A computer program based on Shake-and-Bake, a dual-space direct-methods procedure for determining crystal structures from X-ray diffraction data. |
| SPEC_/_Certified_Scientific_Software A UNIX-based software package for instrument control and data acquisition used for X-ray diffraction laboratories. |
| TOPOS A program package for multipurpose geometrical and topological analysis of crystal structures. It works with crystal structure databases. |
| TOPXD Topological analysis program for experimental static electron density based on Hansen-Coppens multipole formalism. |
| UMWEG_and_PSILAM Programs for calculation and graphical representation of multiple diffraction patterns. |
| Uppsala_Software_Factory Software for macromolecular crystallography and structural biology. Many of these programs collaborate with "O" (see there). |
| WinGX System of programs for solving, refining and analysing single crystal X-ray diffraction data for small molecules. Provides a consistent and user-friendly GUI for some of the best publicly-available cr |
| XAct An application that can be used to construct, maintain, and record the results of many crystallisation experiments. |
| XPowder A program for qualitative (PDF2 data base) and least-square full-profile quantitative analysis of phases in crystaline and amorphous powder samples by X-Ray diffraction. Windows platform. |
| Xtal A package of over sixty programs for calculations ranging from the reduction of raw diffraction intensities, to the solution, refinement and publication of crystal structures. These are applicable to |
| Alice_Software Database system to build and publish synonymised checklists of species. Species descriptions include pre-established fields and detailed descriptions employing any number of user-defined fields. |
| Alternative_Splice_Site_Predictor ASSP predicts putative alternative exon isoform, cryptic, and constitutive splice sites of internal (coding) exons. |
| The_BioCatalog Software directory of general interest in molecular biology and genetics. Not updated since 2000. |
| BioConstructor_Molecular_Cloning_Software BioConstructor is a bioinformatics solution focussing on molecular cloning. Runs on Windows, Mac OS X, Linux. |
| Broad_Institute_Genetics_Software Offers a wide range of software for genome sequence analysis, genetic variation, linkage analysis, expression analysis, and PCR primer selection. |
| CREME__Cis-REgulatory_Module_Explorer Identifies modules of putative transcription factor binding sites that are specific to promoters of co-expressed human genes. Provides a resource for decoding microarray experiments. |
| Free_FASTA/MultiFASTA_converter_tool This tool will look for all FASTA files in the specified folder and will merge their content in a single file, generating a standard or custom MultiFASTA file. Just download the program and double cli |
| Gene_Array_Analyzer_Software Software for the efficient management, analysis and visualization of large amounts of gene expression data. |
| Gene_Expression_Open_Source_System Open source database and analysis package used to archive and analyze expression data from gene chip experiments. Includes microarray center workflow management, and researcher tools to analyze final |
| GeneSifter Web-based microarray analysis system that combines data management and analytical functions with integrated, current gene annotation from public databases. Product overview in pdf format. |
| Genetic_Linkage_Analysis Offers links and other resources for genetic analysis software from the Rockefeller University. |
| Genetic_Network_Maps_as_Java_Applets Genetic networks controlling development in Sea Urchin represented as Java applets. Formal scheme. Molecular interactions modelled as Petri Net. |
| Genex_Open_Source_Gene_Expression_Database Genex is an open source database for storing, processing, and analyzing gene expression microarray data.It is intended for local installation by medium sized laboratories with some system administrati |
| GENtle GPL software for viewing and editing DNA and amino acid sequences. Integrated alignment, PCR, BLAST searches, and shared databases. Windows version is available for download (English and German). |
| Hands_on_Genetics Instructional software for basic genetics, such as DNA, PCR, Mendel, Hardy-Weinberg, meiosis and computer simulations. Freeware for Mac and Windows. |
| MapMakerDrawer Program that draws chromosome maps (as EMF files) using the output of MapMaker EXP. Delphi source code is freely available upon request. The software is available under the MIT licence. |
| MuStaR_Sequence_Variant_Database_Software Designed to create a database of mutation loci, to make this information available to as many people as possible. No longer being maintained. |
| Mutation_Explorer Software to automatically detect mutations from DNA sequence data, including homozygous, heterozygous, insertion and deletion. |
| Pegasys Open source software for executing and integrating analyses of biological sequences. Includes documentation and installation instructions. |
| PyMoods A software application for visualizing genomic data. Can be used to analyze and display relations between complete genomes, genomic fragments, proteins, ESTs, full length cDNAs, and gene expression d |
| The_Sequence_Manipulation_Suite The Sequence Manipulation Suite is a collection of JavaScript programs for generating, formatting, and analyzing short DNA and protein sequences. It is commonly used by molecular biologists, for teach |
| STRand Open-source Windows program to automate or speed up the analysis of DNA fragment length polymorphism samples run on ABI3730, 3700 and 377 sequencers. Instructions for use and program download availabl |
| Synopsis Commercial Windows software for visualization and annotation of genomic data. |
| TagSorter Database application designed to simplify the collation, sorting, comparison and identification of SAGE tag sequences. |
| Kevin_Kelly_--_The_Technium From the founding editor of Wired, a series of posts, with public comments, on the future of science, technology, and society. |
| Nic\'s_Corner__From_the_Stars_to_the_Mind Focused on science, arts and letters. |
| Science-as-Culture Internet mailing list. Site includes subscription tools and archives. |
| Sci-Tech Science, Technology and their interactions; includes a discussion board. |
| Southern_California_Sigma_Xi_Science_Café Monthly meetings in local coffee shops to discuss the science behind current events. Includes information about current meeting, subject of future meetings, and how to register to obtain the location |
| Aetiology Discussing causes, origins, evolution and implications of disease and other phenomena. |
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